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m gallinarum  (ATCC)


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    ATCC m gallinarum
    M Gallinarum, supplied by ATCC, used in various techniques. Bioz Stars score: 93/100, based on 11 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    Average 93 stars, based on 11 article reviews
    m gallinarum - by Bioz Stars, 2026-02
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    General genome features of the avian mycoplasma strains used in the different comparative analyses

    Journal: BMC Genomics

    Article Title: A sweeping view of avian mycoplasmas biology drawn from comparative genomic analyses

    doi: 10.1186/s12864-024-11201-5

    Figure Lengend Snippet: General genome features of the avian mycoplasma strains used in the different comparative analyses

    Article Snippet: The location of some genes encoding for enzymes involved in energetic metabolism on genomes of the three strains; M. meleagridis ATCC 29294, M. meleagridis MM_26B8_IPT, and M. gallinarum Mgn_IPT was graphically visualized in Fig. . Fig. 5 Circular visualization of the genome architecture of Mycoplasma meleagridis type strain ATCC 25294, Mycoplasma meleagridis field strain MM_26B8_IPT, and Mycoplasma gallinarum field strain Mgn_IPT.

    Techniques: Isolation, Plasmid Preparation

    Energetic pathways comparison in avian mycoplasmas group. Numbers from 1 to 23 correspond to genes encoding for proteins involved in energetic pathways in avian mycoplasmas: ADI (Arginine dihydrolase) pathway. 1: arcA (Arginine deiminase); 2: arcB (Ornithine carbamoyltransferase); 3: arcC (Carbamate kinase). EMP (Embden-meyerhof-parnas) pathway. 4: pgi (Glucose-6-phosphate isomerase); 5: pfk (6-phosphofructokinase); 6: fba (Fructose biphosphate aldolase); 7: tpiA (Triose-phosphate isomerase); 8: gap (Glyceraldehyde 3-phosphate dehydrogenase); 9: pgk (3-phosphoglycerate kinase); 10: pgm (Phosphoglycerate mutase); 11: eno (Enolase); 12: pyk (Pyruvate kinase). PDH (Pyruvate dehydrogenase) complex. 13: pdhA (Pyruvate dehydrogenase E1 α subunit); 14: pdhB (Pyruvate dehydrogenase E1 β subunit); 15: pdhC (Dihydrolipoamide acetyltransferase E2); 16: pdhD (Dihydrolipoamide dehydrogenase E3). PPP (Pentose phosphate pathway). 17: g6pd (Glucose-6-phosphate dehydrogenase); 18: pgls (6-phosphogluconolactonase); 19: pgd (6-phosphogluconate dehydrogenase); 20: ripB (Ribose-5-phosphate isomerase); 21: rpe (Ribulose 5-phosphate 3-epimerase); 22: tkt (Transketolase); 23: Taldo1 (Transaldolase). Abbreviations mentioned in the left refer to the 40 avian mycoplasma strains studied here. Strains were delimited into brackets according to their metabolic pathway as follows: 1st group (Glucose-utilizing avian mycoplasmas). Ma1 and Ma2: Mycoplasma anatis strains 1340 and NCTC10156, respectively. Mco: Mycoplasma columborale strain NCTC10179. Mgc1 and Mgc2: Mycoplasma gallinaceum strains B2096 8B and NCTC10183, respectively. Mi: Mycoplasma imitans strain 51306. Ms1-Ms4: Mycoplasma synoviae strains 53, WVU 1853 T , MS-H (chicken), and MS-H (vaccine), respectively. MG1-MG20: Mycoplasma gallisepticum strains Rlow , Rhigh , F, S6, VA94_7994-1-7P, NC95_13295-2-2P, NC96_1596-4-2P, NY01_2001.047–5-1P, WI01_2001.043–13-2P, NC06_2006.080–5-2P, CA06_2006.052–5-2P, NC08_2008.031–4-3P, K6356, K6372, K5322C, K6112B, K2966, K6222B, K6216D, and K6208B, respectively. 2nd group (Arginine-utilizing avian mycoplasmas). Mgn: Mycoplasma gallinarum strain Mgn_IPT. Mci1 and Mci2: Mycoplasma columbinum strains NCTC10178 and SF7, respectively. Mm1-Mm4: Mycoplasma meleagridis strains 25294, MM_26B8_IPT, NCTC10153, and IZSVE/2944/9/2011, respectively. 3rd group (Glucose and arginine utilizing-avian mycoplasmas). Mio1-Mio3: Mycoplasma iowae strains 695, NCTC10185, and DK-CPA, respectively. Strains with complete genome are printed in bold type. Colored cells refer to the existence of the corresponding gene involved in energetic pathways. The absence of a gene is noticed by a blank or grey-colored cells for strains with complete and draft genomes, respectively

    Journal: BMC Genomics

    Article Title: A sweeping view of avian mycoplasmas biology drawn from comparative genomic analyses

    doi: 10.1186/s12864-024-11201-5

    Figure Lengend Snippet: Energetic pathways comparison in avian mycoplasmas group. Numbers from 1 to 23 correspond to genes encoding for proteins involved in energetic pathways in avian mycoplasmas: ADI (Arginine dihydrolase) pathway. 1: arcA (Arginine deiminase); 2: arcB (Ornithine carbamoyltransferase); 3: arcC (Carbamate kinase). EMP (Embden-meyerhof-parnas) pathway. 4: pgi (Glucose-6-phosphate isomerase); 5: pfk (6-phosphofructokinase); 6: fba (Fructose biphosphate aldolase); 7: tpiA (Triose-phosphate isomerase); 8: gap (Glyceraldehyde 3-phosphate dehydrogenase); 9: pgk (3-phosphoglycerate kinase); 10: pgm (Phosphoglycerate mutase); 11: eno (Enolase); 12: pyk (Pyruvate kinase). PDH (Pyruvate dehydrogenase) complex. 13: pdhA (Pyruvate dehydrogenase E1 α subunit); 14: pdhB (Pyruvate dehydrogenase E1 β subunit); 15: pdhC (Dihydrolipoamide acetyltransferase E2); 16: pdhD (Dihydrolipoamide dehydrogenase E3). PPP (Pentose phosphate pathway). 17: g6pd (Glucose-6-phosphate dehydrogenase); 18: pgls (6-phosphogluconolactonase); 19: pgd (6-phosphogluconate dehydrogenase); 20: ripB (Ribose-5-phosphate isomerase); 21: rpe (Ribulose 5-phosphate 3-epimerase); 22: tkt (Transketolase); 23: Taldo1 (Transaldolase). Abbreviations mentioned in the left refer to the 40 avian mycoplasma strains studied here. Strains were delimited into brackets according to their metabolic pathway as follows: 1st group (Glucose-utilizing avian mycoplasmas). Ma1 and Ma2: Mycoplasma anatis strains 1340 and NCTC10156, respectively. Mco: Mycoplasma columborale strain NCTC10179. Mgc1 and Mgc2: Mycoplasma gallinaceum strains B2096 8B and NCTC10183, respectively. Mi: Mycoplasma imitans strain 51306. Ms1-Ms4: Mycoplasma synoviae strains 53, WVU 1853 T , MS-H (chicken), and MS-H (vaccine), respectively. MG1-MG20: Mycoplasma gallisepticum strains Rlow , Rhigh , F, S6, VA94_7994-1-7P, NC95_13295-2-2P, NC96_1596-4-2P, NY01_2001.047–5-1P, WI01_2001.043–13-2P, NC06_2006.080–5-2P, CA06_2006.052–5-2P, NC08_2008.031–4-3P, K6356, K6372, K5322C, K6112B, K2966, K6222B, K6216D, and K6208B, respectively. 2nd group (Arginine-utilizing avian mycoplasmas). Mgn: Mycoplasma gallinarum strain Mgn_IPT. Mci1 and Mci2: Mycoplasma columbinum strains NCTC10178 and SF7, respectively. Mm1-Mm4: Mycoplasma meleagridis strains 25294, MM_26B8_IPT, NCTC10153, and IZSVE/2944/9/2011, respectively. 3rd group (Glucose and arginine utilizing-avian mycoplasmas). Mio1-Mio3: Mycoplasma iowae strains 695, NCTC10185, and DK-CPA, respectively. Strains with complete genome are printed in bold type. Colored cells refer to the existence of the corresponding gene involved in energetic pathways. The absence of a gene is noticed by a blank or grey-colored cells for strains with complete and draft genomes, respectively

    Article Snippet: The location of some genes encoding for enzymes involved in energetic metabolism on genomes of the three strains; M. meleagridis ATCC 29294, M. meleagridis MM_26B8_IPT, and M. gallinarum Mgn_IPT was graphically visualized in Fig. . Fig. 5 Circular visualization of the genome architecture of Mycoplasma meleagridis type strain ATCC 25294, Mycoplasma meleagridis field strain MM_26B8_IPT, and Mycoplasma gallinarum field strain Mgn_IPT.

    Techniques: Comparison

    Circular visualization of the genome architecture of Mycoplasma meleagridis type strain ATCC 25294, Mycoplasma meleagridis field strain MM_26B8_IPT, and Mycoplasma gallinarum field strain Mgn_IPT. From inside to outside, the first circle shows the GC skew (inward projections in purple and outward projections in gold). The second circle shows the distribution of rRNA, tRNA, and tmRNA genes (in grey), while the third circle shows the CDSs (in light blue). Bacterial replication initiator ( dnaA ) (in black) and some genes related to virulence (in red and pink) and to energy metabolism (in green) were reported. MIB-MIP (Mycoplasma immunoglobulin binding-Mycoplasma immunoglobulin protease), licD (putative lipopolysaccharide diphosphonucleoside choline transferase), arcA (arginine deiminase), arcB (ornithine carbamoyltransferase), arcC (carbamate kinase), pgi (glucose-6-phosphate isomerase), pfk (6-phosphofructokinase), fba (fructose biphosphate aldolase), tpiA (triose-phosphate isomerase), gap (glyceraldehyde 3-phosphate dehydrogenase), pgk (3-phosphoglycerate kinase), pgm (phosphoglycerate mutase), eno (enolase), pyk (pyruvate kinase), pdhA (pyruvate dehydrogenase E1 α subunit), pdhB (pyruvate dehydrogenase E1 β subunit), pdhC (dihydrolipoamide acetyltransferase E2), pdhD (dihydrolipoamide dehydrogenase E3), rpiB ( ribose-5-phosphate isomerase), rpe ( Ribulose 5-phosphate 3-epimerase), tkt (transketolase). The fourth circle shows the position coordinates for each genome sequence. The three genomes are not complete, they are fragmented in contigs. This circular presentation, generated by Artemis DNAPlotter software, is a visualization of assembled contigs. Although this circular DNA map does not represent a complete genome version of one single chromosome, it can give a good estimation for functional annotation as well as an approximate position of genes

    Journal: BMC Genomics

    Article Title: A sweeping view of avian mycoplasmas biology drawn from comparative genomic analyses

    doi: 10.1186/s12864-024-11201-5

    Figure Lengend Snippet: Circular visualization of the genome architecture of Mycoplasma meleagridis type strain ATCC 25294, Mycoplasma meleagridis field strain MM_26B8_IPT, and Mycoplasma gallinarum field strain Mgn_IPT. From inside to outside, the first circle shows the GC skew (inward projections in purple and outward projections in gold). The second circle shows the distribution of rRNA, tRNA, and tmRNA genes (in grey), while the third circle shows the CDSs (in light blue). Bacterial replication initiator ( dnaA ) (in black) and some genes related to virulence (in red and pink) and to energy metabolism (in green) were reported. MIB-MIP (Mycoplasma immunoglobulin binding-Mycoplasma immunoglobulin protease), licD (putative lipopolysaccharide diphosphonucleoside choline transferase), arcA (arginine deiminase), arcB (ornithine carbamoyltransferase), arcC (carbamate kinase), pgi (glucose-6-phosphate isomerase), pfk (6-phosphofructokinase), fba (fructose biphosphate aldolase), tpiA (triose-phosphate isomerase), gap (glyceraldehyde 3-phosphate dehydrogenase), pgk (3-phosphoglycerate kinase), pgm (phosphoglycerate mutase), eno (enolase), pyk (pyruvate kinase), pdhA (pyruvate dehydrogenase E1 α subunit), pdhB (pyruvate dehydrogenase E1 β subunit), pdhC (dihydrolipoamide acetyltransferase E2), pdhD (dihydrolipoamide dehydrogenase E3), rpiB ( ribose-5-phosphate isomerase), rpe ( Ribulose 5-phosphate 3-epimerase), tkt (transketolase). The fourth circle shows the position coordinates for each genome sequence. The three genomes are not complete, they are fragmented in contigs. This circular presentation, generated by Artemis DNAPlotter software, is a visualization of assembled contigs. Although this circular DNA map does not represent a complete genome version of one single chromosome, it can give a good estimation for functional annotation as well as an approximate position of genes

    Article Snippet: The location of some genes encoding for enzymes involved in energetic metabolism on genomes of the three strains; M. meleagridis ATCC 29294, M. meleagridis MM_26B8_IPT, and M. gallinarum Mgn_IPT was graphically visualized in Fig. . Fig. 5 Circular visualization of the genome architecture of Mycoplasma meleagridis type strain ATCC 25294, Mycoplasma meleagridis field strain MM_26B8_IPT, and Mycoplasma gallinarum field strain Mgn_IPT.

    Techniques: Binding Assay, Sequencing, Generated, Software, Functional Assay